🎉 add end to end importer test 🎉

tests/tests.py

@@ -40,7 +40,6 @@ config_dic = {
     "user": "root",
     "password": "",
     "database": "test_main",
-    "host": "mariadb",  # gitignore
     "port": 3306,
 }
 
@@ -165,7 +164,7 @@ class TestUtils(TestCase):
         for db in ["test_main", "test_onto", "test_meta", "test_receptors"]:
             execute_one_db(config_dic, db)
 
-    def test_end(self):
+    def test_export_end(self):
 
         this_dir, _ = os.path.split(__file__)
         test_dir = os.path.join(this_dir, "tmp_path")
@@ -177,10 +176,15 @@ class TestUtils(TestCase):
         assert aex.main() is True
         assert equal_dirs(os.path.join(test_dir, "test_main"), test_files) is True
 
-        try:
-            shutil.rmtree(test_dir)
-        except OSError as e:
-            print("Error: %s : %s" % (test_dir, e.strerror))
+    def test_import_end(self):
+
+        this_dir, _ = os.path.split(__file__)
+        test_files = os.path.join(this_dir, "data", "test_data")
+        self.monkeypatch.setitem(aim.TEST_ARGS, "config_db", config_dic)
+        self.monkeypatch.setitem(aim.TEST_ARGS, "project_name", "test_main_airr")
+        self.monkeypatch.setitem(aim.TEST_ARGS, "ssh_group", "test")
+        self.monkeypatch.setitem(aim.TEST_ARGS, "input_path", test_files)
+        assert aim.main() is True
 
     # pd.testing.assert_frame_equal(rearrangements_frame, ontologies_df)  # todo test